Index

A

AdaptiveKDE (class in m3c2.proposal) add() (m3c2.chain.Chain method) (m3c2.chain.ChainParsSplitting method) add_array() (m3c2.chain.Chain method)

add_current() (m3c2.chain.Chain method) adjust_temp() (m3c2.sampler.PTSampler method) as_gb_param() (m3c2.gb.likelihood.FlatLogLik method) as_search_param() (m3c2.gb.likelihood.FlatLogLik method)

C

Chain (class in m3c2.chain) ChainData (class in m3c2.chain) ChainParsSplitting (class in m3c2.chain) check_coeff() (m3c2.gb.fstatistics.Fstat method)

check_stability() (m3c2.chain.KDETracker method) check_update() (m3c2.proposal.HyperModelWhat method) compute() (m3c2.gb.fstatistics.Fstat method) counting() (m3c2.chain.KDETracker method) CovProposal (class in m3c2.proposal)

D

DE (class in m3c2.proposal)

DE() (m3c2.proposal.DE method) DE_all() (m3c2.proposal.DE method)

F

f_stats() (m3c2.gb.fstatistics.Fstat method) fast() (m3c2.proposal.ParSplitProposal method) fixangle() (m3c2.gb.fstatistics.Fstat method)

FlatLogLik (class in m3c2.gb.likelihood) Fstat (class in m3c2.gb.fstatistics) full_prior() (m3c2.chain.ChainParsSplitting method) full_step() (m3c2.chain.Chain method)

G

get_coeff() (m3c2.gb.fstatistics.Fstat method) get_cov() (m3c2.proposal.Gibbs method) (m3c2.proposal.Proposal method) get_direction() (m3c2.proposal.Gibbs method) get_direction_() (m3c2.proposal.Slice method)

get_log_prior() (m3c2.gb.likelihood.FlatLogLik method) get_proposal() (m3c2.proposal.CovProposal method) get_ratio() (m3c2.chain.Chain method) get_sample() (m3c2.chain.Chain method) get_size() (m3c2.chain.Chain method) Gibbs (class in m3c2.proposal)

H

harmonic_shift() (in module m3c2.gb.proposal) HarmonicShift (class in m3c2.gb.proposal)

HMSCAM() (m3c2.proposal.HyperModelWhat method) HMslice() (m3c2.proposal.HyperModelWhat method) HyperModelWhat (class in m3c2.proposal)

I

in_prior() (m3c2.gb.likelihood.FlatLogLik method) init_cov() (m3c2.chain.Chain method) (m3c2.chain.ChainParsSplitting method)

init_logger() (in module m3c2.proposal) is_in_prior() (in module m3c2.gb.likelihood)

K

kde_jump() (m3c2.proposal.AdaptiveKDE method)

KDETracker (class in m3c2.chain)

L

likelihood_flat() (in module m3c2.gb.likelihood)

loglik() (m3c2.gb.likelihood.FlatLogLik method) logprior() (m3c2.gb.likelihood.FlatLogLik method)

M

m3c2.chain module m3c2.gb.fstatistics module m3c2.gb.likelihood module m3c2.gb.proposal module m3c2.proposal module m3c2.sampler module

make_prior() (m3c2.gb.likelihood.FlatLogLik method) MH_step() (m3c2.chain.Chain method) model_selection() (m3c2.proposal.HyperModelWhat method) module m3c2.chain m3c2.gb.fstatistics m3c2.gb.likelihood m3c2.gb.proposal m3c2.proposal m3c2.sampler

P

ParSplitProposal (class in m3c2.proposal) plotAE() (in module m3c2.gb.likelihood) print_info() (m3c2.chain.Chain method)

Prior (class in m3c2.proposal) Proposal (class in m3c2.proposal) PTSampler (class in m3c2.sampler)

R

random_point() (in module m3c2.gb.likelihood) ReMHA (class in m3c2.proposal) ReMHA() (m3c2.proposal.ReMHA method)

resume() (m3c2.sampler.Sampler method) run_mcmc() (m3c2.sampler.PTSampler method) (m3c2.sampler.Sampler method)

S

sample_prior() (m3c2.proposal.Prior method) Sampler (class in m3c2.sampler) save_to_disk() (m3c2.sampler.Sampler method) SCAM (class in m3c2.proposal) SCAM() (m3c2.proposal.Gibbs method) (m3c2.proposal.SCAM method) set_current() (m3c2.chain.Chain method) set_kl() (m3c2.chain.KDETracker method) set_proposals() (m3c2.chain.Chain method) (m3c2.sampler.Sampler method)

set_run_size() (m3c2.chain.Chain method) set_starting_point() (m3c2.sampler.Sampler method) set_temperature() (in module m3c2.sampler) shift() (m3c2.gb.proposal.HarmonicShift method) Slice (class in m3c2.proposal) slice() (m3c2.proposal.Gibbs method) (m3c2.proposal.Slice method) swap() (m3c2.sampler.PTSampler method) swap_elligibility() (m3c2.sampler.PTSampler method) swapped() (m3c2.chain.Chain method)

T

to_dict() (m3c2.chain.ChainData method)

U

update_cov() (m3c2.chain.Chain method) (m3c2.chain.ChainParsSplitting method) (m3c2.proposal.CovProposal method) (m3c2.proposal.Gibbs method)

update_kde() (m3c2.chain.Chain method) update_modes() (m3c2.chain.Chain method)

W

wrap() (m3c2.chain.Chain static method)